What method are you using to sterilise your seed?
I use the microwave method to sterilise the media as well. I don't bother to wait and see if there is contamination in the flasks though because I use the vapour sterilisation method for the seed. If you've gotten any contaminants on the surface of the media after microwaving, the vapour sterilisation method kills it.
So far, I haven't gotten any contamination from the media or the seed, only from not sealing the flasks properly. When that happens you'll see the contamination start around the edges of the media closest to where the seal was broken.
If you're not using the vapour sterilisation method for the seed then maybe best to wait and see if your flasks are clean. A week should be more than enough in my opinion but some people recommend two weeks.
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