From looking at the photos in the first post I would suggest spraying with copper soap, it controls a lot of microbe pathogens and does not hurt my Cattleyas.
Bonide
http://www.bonide.com/lbonide/backlabels/l811.pdf
People say that copper compounds can damage Dendrobiums so I keep it away from the few Dendrobiums that I have, it is also toxic to Bromeliads.
I prefer the copper soap to copper sulfate such as Phyton in the belief that the copper soap may be less phytotoxic.
If things continue to spread, and since I can't identify which microbe type is causing a problem, I would just start rotating through every antimicrobial that I have - Heritage DF, thiomyl, chlorothalonil and mancozeb in addition to the copper soap.