To me the purple looks like it is due to light exposure, and that is not a bad thing as long as nothing burns.
I think the purple you are concerned about is related to Fusarium wilt. I see no indications of that disease here. You can find out more about Fusarium wilt at
Orchid Pests, Orchid Diseases
I'll toss in a little unsolicited advice - I recommend that the next time you repot, consider either a terracotta pot, a plastic net pot, or a lot more inert drainage material (styrofoam, etc) int the bottom of the pot if you must stay with clear plastic. These potting options will help facilitate root drying in between watering - something Cattleya alliance plants really need to keep the roots from rotting.