Phals live on trees in nature, so in nature their roots aren't even covered at all!
You can and should leave your top phal roots bare. Additionally, phalaenopsis orchids grow air roots, which are meant to hang out in the air, and you should never cut those and you don't have to put them down in the pot, either.
Some say never to put air roots in the pot under the bark media, but I have done it and they were not negatively affected.
The roots on this plant look nice, fat, and healthy. I don't see anything wrong with them, and the top ones are probably just a little bit dry, and that's okay.
They really don't look bad to me.
Your phal has many healthy looking roots, so if a few shrivel, that is not too bad.
I personally would put a LOT more holes into the sides of your pot for ventilation, but that is your choice and not everyone does it.
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